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autodE documentation
Install
Quick Start
Configuration
Reference
Atoms
Bonds
Calculation
Conformers
Conf Gen
Conformer
Conformers
PES
Potential Energy Surfaces
Min Energy Pathway
Reactions
Multistep Reaction
Reaction
Reaction Types
SMILES
Molecules from SMILES
SMILES Parser
3D Geometry Builder
SMILES Atom Types
SMILES Angles
SMILES Base
Solvent
Solvents
Explicit Solvent
Species
Complex
Molecule
Species
Nudged elastic band
NEB Transition states
Original NEB
Climbing image NEB
Image dependent pair potential
Transition States
Base
Locate TSs
Templates
Transition State
Truncation
TS Guess
Thermochemistry
Ideal gas model
Symmetry
Wrappers
Base
Gaussian09
Keywords
MOPAC
NWChem
ORCA
XTB
Optimisation
Coordinates
Optimisers
Bond Rearrangement
Configuration
Constants
Exceptions
Geometry
Input Output
Logging
Methods
Molecular Graphs
Plotting
Point Charges
Substitution
Units
Utilities
Values
Hessians
Troubleshooting
Examples
Species
Molecules
Reactions
Non-covalent Interaction Complexes
Molecular Manipulation
1D PES Generation
2D PES Generation
Conformer Generation
RMSD
Transition States
Thermochemistry
Changelog
Development
Code Structure
Contributing to autodE
Citation
Paper
.rst
.pdf
Base
Base
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