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autodE documentation
Install
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Calculation
Conformers
Conf Gen
Conformer
Conformers
PES
Potential Energy Surfaces
Min Energy Pathway
Reactions
Multistep Reaction
Reaction
Reaction Types
SMILES
Molecules from SMILES
SMILES Parser
3D Geometry Builder
SMILES Atom Types
SMILES Angles
SMILES Base
Solvent
Solvents
Explicit Solvent
Species
Complex
Molecule
Species
Nudged elastic band
NEB Transition states
Original NEB
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Image dependent pair potential
Transition States
Base
Locate TSs
Templates
Transition State
Truncation
TS Guess
Thermochemistry
Ideal gas model
Symmetry
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Base
Gaussian09
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Configuration
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Molecular Graphs
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Point Charges
Substitution
Units
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Values
Hessians
Troubleshooting
Examples
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Reactions
Non-covalent Interaction Complexes
Molecular Manipulation
1D PES Generation
2D PES Generation
Conformer Generation
RMSD
Transition States
Thermochemistry
Changelog
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Code Structure
Contributing to autodE
Citation
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Calculation
Calculation
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